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  5. AT1G52830

AT1G52830 (SHY1, IAA6)


Aliases : SHY1, IAA6

Description : indole-3-acetic acid 6


Gene families : OG0000129 (Archaeplastida) Phylogenetic Tree(s): OG0000129_tree ,
OG_05_0000051 (LandPlants) Phylogenetic Tree(s): OG_05_0000051_tree ,
OG_06_0016993 (SeedPlants) Phylogenetic Tree(s): OG_06_0016993_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G52830
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AT1G04550 IAA12, BDL AUX/IAA transcriptional regulator family protein 0.04 Archaeplastida
AT1G15580 ATAUX2-27, AUX2-27, IAA5 indole-3-acetic acid inducible 5 0.05 Archaeplastida
AT3G15540 MSG2, IAA19 indole-3-acetic acid inducible 19 0.04 Archaeplastida
AT3G16500 PAP1, IAA26 phytochrome-associated protein 1 0.07 Archaeplastida
AT3G62100 IAA30 indole-3-acetic acid inducible 30 0.04 Archaeplastida
AT4G14560 IAA1, AXR5 indole-3-acetic acid inducible 0.04 Archaeplastida
AT4G28640 IAA11 indole-3-acetic acid inducible 11 0.03 Archaeplastida
AT5G25890 IAA28, IAR2 indole-3-acetic acid inducible 28 0.04 Archaeplastida
GSVIVT01000720001 No alias Auxin-induced protein 22D OS=Vigna radiata var. radiata 0.04 Archaeplastida
GSVIVT01015449001 No alias Auxin-responsive protein IAA17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017158001 No alias Auxin-induced protein AUX22 OS=Glycine max 0.04 Archaeplastida
GSVIVT01028242001 No alias Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica 0.04 Archaeplastida
LOC_Os02g13520.1 No alias repressor component Aux/IAA of auxin receptor complex 0.02 Archaeplastida
LOC_Os03g43400.1 No alias Auxin-responsive protein IAA11 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os06g07040.1 No alias Auxin-responsive protein IAA20 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os06g22870.1 No alias Auxin-responsive protein IAA21 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os06g39590.1 No alias Auxin-responsive protein IAA23 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os12g40900.1 No alias Auxin-responsive protein IAA31 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Mp6g05000.1 No alias Auxin-responsive protein IAA17 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo85035 No alias Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc03g120380.3.1 No alias Auxin-induced protein AUX22 OS=Glycine max... 0.03 Archaeplastida
Zm00001e012059_P002 No alias Auxin-responsive protein IAA13 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e017434_P002 No alias Auxin-responsive protein IAA4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e023600_P003 No alias Auxin-responsive protein IAA10 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e032955_P001 No alias Auxin-responsive protein IAA24 OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009704 de-etiolation IMP Interproscan
BP GO:0009733 response to auxin IMP Interproscan
BP GO:0009733 response to auxin IEP Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006446 regulation of translational initiation IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034605 cellular response to heat IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0045947 negative regulation of translational initiation IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0070417 cellular response to cold IEP Neighborhood
BP GO:0071497 cellular response to freezing IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 31 184
No external refs found!