AMTR_s00061p00200560 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.242

Description : Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica

Gene families : OG0001092 (Archaeplastida) Phylogenetic Tree(s): OG0001092_tree ,
OG_05_0000685 (LandPlants) Phylogenetic Tree(s): OG_05_0000685_tree ,
OG_06_0000635 (SeedPlants) Phylogenetic Tree(s): OG_06_0000635_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00061p00200560
Cluster	HCCA: Cluster_175

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01002911001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	Archaeplastida
GSVIVT01004272001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.05	Archaeplastida
GSVIVT01004458001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.06	Archaeplastida
GSVIVT01006764001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	Archaeplastida
GSVIVT01007039001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	Archaeplastida
GSVIVT01014705001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	Archaeplastida
Gb_25252	No alias	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.07	Archaeplastida
LOC_Os09g30120.1	No alias	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.05	Archaeplastida
MA_10426044g0010	No alias	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.02	Archaeplastida
MA_10430010g0010	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	Archaeplastida
MA_10430098g0010	No alias	Cellulose synthase-like protein E1 OS=Arabidopsis...	0.02	Archaeplastida
MA_10431964g0010	No alias	Cellulose synthase-like protein E1 OS=Arabidopsis...	0.03	Archaeplastida
MA_264460g0010	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	Archaeplastida
MA_399166g0010	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.05	Archaeplastida
MA_6388939g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_7565822g0010	No alias	No annotation	0.02	Archaeplastida
Solyc07g065660.4.1	No alias	Cellulose synthase-like protein E1 OS=Arabidopsis...	0.06	Archaeplastida
Zm00001e034466_P001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
MF	GO:0004096	catalase activity	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Neighborhood
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0005231	excitatory extracellular ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0005234	extracellularly glutamate-gated ion channel activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008066	glutamate receptor activity	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Neighborhood
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022835	transmitter-gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0030151	molybdenum ion binding	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
CC	GO:0030288	outer membrane-bounded periplasmic space	IEP	Neighborhood
MF	GO:0030594	neurotransmitter receptor activity	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
CC	GO:0042597	periplasmic space	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	98	387
IPR005150	Cellulose_synth	407	724

External Links

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AMTR_s00061p00200560 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation