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  5. AMTR_s00069p00097470

AMTR_s00069p00097470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.61

Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease


Gene families : OG0000617 (Archaeplastida) Phylogenetic Tree(s): OG0000617_tree ,
OG_05_0000454 (LandPlants) Phylogenetic Tree(s): OG_05_0000454_tree ,
OG_06_0000396 (SeedPlants) Phylogenetic Tree(s): OG_06_0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00097470
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00044730 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.03 Archaeplastida
GSVIVT01010602001 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
GSVIVT01017301001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
GSVIVT01019824001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
LOC_Os10g37760.1 No alias protease (RBL) 0.09 Archaeplastida
Mp6g05540.1 No alias protease (RBL) 0.06 Archaeplastida
Pp3c14_10400V3.1 No alias RHOMBOID-like 1 0.03 Archaeplastida
Pp3c17_14100V3.1 No alias RHOMBOID-like 1 0.03 Archaeplastida
Pp3c20_8630V3.1 No alias RHOMBOID-like protein 6 0.02 Archaeplastida
Pp3c23_15050V3.1 No alias RHOMBOID-like 1 0.02 Archaeplastida
Solyc06g005580.4.1 No alias protease (RBL) 0.04 Archaeplastida
Solyc08g080500.3.1 No alias protease (RBL) 0.03 Archaeplastida
Zm00001e002140_P002 No alias protease (RBL) 0.05 Archaeplastida
Zm00001e007219_P001 No alias protease (RBL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 115 217
No external refs found!