1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00069p00189250

AMTR_s00069p00189250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.192

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL22 component


Gene families : OG0002238 (Archaeplastida) Phylogenetic Tree(s): OG0002238_tree ,
OG_05_0002172 (LandPlants) Phylogenetic Tree(s): OG_05_0002172_tree ,
OG_06_0002838 (SeedPlants) Phylogenetic Tree(s): OG_06_0002838_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00189250
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT3G05560 No alias Ribosomal L22e protein family 0.13 Archaeplastida
AT5G27770 No alias Ribosomal L22e protein family 0.14 Archaeplastida
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
GSVIVT01028021001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Gb_08874 No alias component RPL22 of LSU proteome component 0.11 Archaeplastida
Gb_36164 No alias component RPL22 of LSU proteome component 0.1 Archaeplastida
LOC_Os03g22340.1 No alias component RPL22 of LSU proteome component 0.16 Archaeplastida
LOC_Os07g47710.1 No alias component RPL22 of LSU proteome component 0.13 Archaeplastida
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.1 Archaeplastida
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.14 Archaeplastida
Pp3c11_630V3.1 No alias Ribosomal L22e protein family 0.13 Archaeplastida
Pp3c11_680V3.1 No alias Ribosomal L22e protein family 0.07 Archaeplastida
Pp3c16_17710V3.1 No alias Ribosomal L22e protein family 0.02 Archaeplastida
Pp3c1_120V3.1 No alias Ribosomal L22e protein family 0.15 Archaeplastida
Pp3c2_28500V3.1 No alias Ribosomal L22e protein family 0.14 Archaeplastida
Pp3c2_28510V3.1 No alias Ribosomal L22e protein family 0.14 Archaeplastida
Pp3c6_5370V3.1 No alias Ribosomal L22e protein family 0.03 Archaeplastida
Pp3c7_27030V3.1 No alias Ribosomal L22e protein family 0.1 Archaeplastida
Smo270704 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Solyc01g099830.3.1 No alias component RPL22 of LSU proteome component 0.15 Archaeplastida
Solyc09g075150.3.1 No alias component RPL22 of LSU proteome component 0.06 Archaeplastida
Solyc09g075155.1.1 No alias component RPL22 of LSU proteome component 0.1 Archaeplastida
Zm00001e010958_P001 No alias component RPL22 of LSU proteome component 0.07 Archaeplastida
Zm00001e035835_P001 No alias component RPL22 of LSU proteome component 0.15 Archaeplastida
Zm00001e038221_P001 No alias component RPL22 of LSU proteome component 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 12 123
No external refs found!