AMTR_s00074p00124400 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00074.39

Description : Protein modification.disulfide bond formation.endoplasmic reticulum.protein disulfide isomerase (PDI-M)

Gene families : OG0005373 (Archaeplastida) Phylogenetic Tree(s): OG0005373_tree ,
OG_05_0007302 (LandPlants) Phylogenetic Tree(s): OG_05_0007302_tree ,
OG_06_0007749 (SeedPlants) Phylogenetic Tree(s): OG_06_0007749_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00074p00124400
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT1G04980 PDI10, PDIL2-2,... PDI-like 2-2 0.12 Archaeplastida
AT2G32920 ATPDI9, PDIL2-3,... PDI-like 2-3 0.07 Archaeplastida
Cre07.g328150 No alias Protein modification.disulfide bond... 0.07 Archaeplastida
Gb_35388 No alias protein disulfide isomerase (PDI-M) 0.02 Archaeplastida
LOC_Os09g27830.1 No alias protein disulfide isomerase (PDI-M) 0.14 Archaeplastida
MA_12242g0010 No alias protein disulfide isomerase (PDI-M) 0.06 Archaeplastida
Smo232026 No alias Protein modification.disulfide bond... 0.04 Archaeplastida
Solyc07g049450.3.1 No alias protein disulfide isomerase (PDI-M) 0.06 Archaeplastida
Zm00001e034322_P001 No alias protein disulfide isomerase (PDI-M) 0.13 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 27 126
IPR013766 Thioredoxin_domain 156 255
No external refs found!