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  5. AMTR_s00077p00178230

AMTR_s00077p00178230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.199

Description : Reticulon-like protein B5 OS=Arabidopsis thaliana


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0000298 (SeedPlants) Phylogenetic Tree(s): OG_06_0000298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00178230
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AT2G46170 No alias Reticulon family protein 0.01 Archaeplastida
Cre06.g308950 No alias No description available 0.01 Archaeplastida
GSVIVT01003159001 No alias Reticulon-like protein B11 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g21840.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
LOC_Os05g24770.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
MA_10432752g0010 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
Solyc01g095200.3.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
Solyc08g081730.4.1 No alias ER-associated protein (Reticulon) 0.05 Archaeplastida
Solyc10g011870.3.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004864 protein phosphatase inhibitor activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019212 phosphatase inhibitor activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 72 230
No external refs found!