1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00097p00165740

AMTR_s00097p00165740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00097.53

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0015386 (LandPlants) Phylogenetic Tree(s): OG_05_0015386_tree ,
OG_06_0015090 (SeedPlants) Phylogenetic Tree(s): OG_06_0015090_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00097p00165740
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013935001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.03 Archaeplastida
GSVIVT01035852001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_17210 No alias transcription factor (DREB). C2H2 zinc finger... 0.03 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.02 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_35474 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_36010 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
LOC_Os04g46240.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os05g49700.1 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10431706g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_2040g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_425410g0010 No alias Ethylene-responsive transcription factor RAP2-13... 0.02 Archaeplastida
MA_67841g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_83118g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
Pp3c1_7740V3.1 No alias ethylene responsive element binding factor 1 0.03 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc03g114440.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc10g009110.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc11g012980.1.1 No alias Ethylene-responsive transcription factor ERF012... 0.04 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.03 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.02 Archaeplastida
Zm00001e006139_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.02 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e014413_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e015327_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.02 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 124 174
No external refs found!