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  5. AMTR_s00106p00050320

AMTR_s00106p00050320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.28

No description available


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0002361 (LandPlants) Phylogenetic Tree(s): OG_05_0002361_tree ,
OG_06_0003196 (SeedPlants) Phylogenetic Tree(s): OG_06_0003196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00050320
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT5G16170 No alias Core-2/I-branching... 0.04 Archaeplastida
GSVIVT01010878001 No alias No description available 0.05 Archaeplastida
GSVIVT01035340001 No alias No description available 0.06 Archaeplastida
Gb_12469 No alias no description available(sp|q65xs5|bc10_orysj : 404.0) 0.02 Archaeplastida
LOC_Os04g20420.1 No alias no description available(sp|q65xs5|bc10_orysj : 171.0) 0.04 Archaeplastida
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.02 Archaeplastida
MA_28957g0010 No alias no description available(sp|q65xs5|bc10_orysj : 129.0) 0.04 Archaeplastida
Pp3c16_11830V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Pp3c24_4540V3.1 No alias Core-2/I-branching... 0.03 Archaeplastida
Solyc02g086550.3.1 No alias no description available(sp|q65xs5|bc10_orysj : 491.0) 0.03 Archaeplastida
Solyc03g121280.4.1 No alias no description available(sp|q65xs5|bc10_orysj : 145.0) 0.03 Archaeplastida
Zm00001e024826_P001 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.03 Archaeplastida
Zm00001e026725_P003 No alias no description available(sp|q65xs5|bc10_orysj : 579.0) 0.02 Archaeplastida
Zm00001e029160_P001 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 56 320
No external refs found!