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  5. AMTR_s00109p00128740

AMTR_s00109p00128740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.132

Description : L-gulonolactone oxidase 3 OS=Arabidopsis thaliana


Gene families : OG0000199 (Archaeplastida) Phylogenetic Tree(s): OG0000199_tree ,
OG_05_0000353 (LandPlants) Phylogenetic Tree(s): OG_05_0000353_tree ,
OG_06_0006851 (SeedPlants) Phylogenetic Tree(s): OG_06_0006851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00128740
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT2G46750 No alias D-arabinono-1,4-lactone oxidase family protein 0.02 Archaeplastida
AT2G46760 No alias D-arabinono-1,4-lactone oxidase family protein 0.04 Archaeplastida
AT5G11540 No alias D-arabinono-1,4-lactone oxidase family protein 0.03 Archaeplastida
Gb_24045 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_31377 No alias L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_32943 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_34197 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g49360.1 No alias L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g29210.1 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10427676g0020 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_123068g0010 No alias Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.04 Archaeplastida
MA_155791g0010 No alias Probable L-gulonolactone oxidase 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_47198g0010 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_7216485g0010 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g10560.1 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g05600.1 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g06140.1 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c3_37800V3.1 No alias D-arabinono-1,4-lactone oxidase family protein 0.02 Archaeplastida
Zm00001e003069_P001 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004321_P001 No alias Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e014133_P001 No alias L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e021853_P001 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEA Interproscan
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 55 186
IPR007173 ALO 416 521
No external refs found!