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  5. AMTR_s00110p00042430

AMTR_s00110p00042430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.17

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002603 (LandPlants) Phylogenetic Tree(s): OG_05_0002603_tree ,
OG_06_0004579 (SeedPlants) Phylogenetic Tree(s): OG_06_0004579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00042430
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.06 Archaeplastida
Cpa|evm.model.tig00000655.28 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cpa|evm.model.tig00001416.8 No alias Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre43.g760497 No alias Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os02g32520.1 No alias chaperone component ClpD of chloroplast Clp-type protease complex 0.04 Archaeplastida
LOC_Os12g12850.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.04 Archaeplastida
MA_229920g0010 No alias Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.02 Archaeplastida
MA_8117g0010 No alias ATP-dependent Clp protease ATP-binding subunit ClpA... 0.12 Archaeplastida
Mp1g02560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.05 Archaeplastida
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.05 Archaeplastida
Pp3c16_17640V3.1 No alias CLPC homologue 1 0.02 Archaeplastida
Pp3c21_5430V3.1 No alias Clp ATPase 0.03 Archaeplastida
Pp3c25_7180V3.1 No alias CLPC homologue 1 0.03 Archaeplastida
Pp3c3_18360V3.1 No alias CLPC homologue 1 0.05 Archaeplastida
Pp3c5_23010V3.1 No alias CLPC homologue 1 0.07 Archaeplastida
Pp3c6_7360V3.1 No alias CLPC homologue 1 0.05 Archaeplastida
Pp3c8_12320V3.1 No alias casein lytic proteinase B3 0.03 Archaeplastida
Smo439163 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Solyc12g042060.3.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.07 Archaeplastida
Zm00001e039805_P002 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.06 Archaeplastida
Zm00001e040778_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0019538 protein metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0016108 tetraterpenoid metabolic process IEP Neighborhood
BP GO:0016109 tetraterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016116 carotenoid metabolic process IEP Neighborhood
BP GO:0016117 carotenoid biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004176 Clp_N 187 236
IPR004176 Clp_N 110 159
IPR003959 ATPase_AAA_core 294 426
IPR019489 Clp_ATPase_C 866 945
No external refs found!