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  5. AMTR_s00110p00122260

AMTR_s00110p00122260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.97

No description available


Gene families : OG0002650 (Archaeplastida) Phylogenetic Tree(s): OG0002650_tree ,
OG_05_0001926 (LandPlants) Phylogenetic Tree(s): OG_05_0001926_tree ,
OG_06_0006263 (SeedPlants) Phylogenetic Tree(s): OG_06_0006263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00122260
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT5G07940 No alias BEST Arabidopsis thaliana protein match is: dentin... 0.04 Archaeplastida
GSVIVT01007885001 No alias No description available 0.03 Archaeplastida
GSVIVT01032923001 No alias No description available 0.02 Archaeplastida
Gb_16170 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_36190 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g11460.1 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_10437109g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp3g09130.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c15_9050V3.1 No alias dentin sialophosphoprotein-related 0.07 Archaeplastida
Pp3c9_21970V3.1 No alias dentin sialophosphoprotein-related 0.08 Archaeplastida
Smo406046 No alias No description available 0.07 Archaeplastida
Solyc03g115250.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g069500.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e000836_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e038728_P005 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004348 glucosylceramidase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!