Aliases : evm_27.TU.AmTr_v1.0_scaffold00129.13
Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00129p00033080 | |
Cluster | HCCA: Cluster_175 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00070300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT2G45220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT2G47550 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.03 | Archaeplastida | |
AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT4G33220 | PME44, ATPME44 | pectin methylesterase 44 | 0.02 | Archaeplastida | |
AT5G51490 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
GSVIVT01023135001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028040001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01037344001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
GSVIVT01037349001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01037352001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01038546001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Gb_01424 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_05254 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Gb_24564 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os11g08750.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_10430460g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_10434786g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
MA_10435891g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_158002g0020 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_18093g0010 | No alias | Pectinesterase 2.1 OS=Solanum lycopersicum... | 0.04 | Archaeplastida | |
MA_2017g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_354248g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_68362g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Mp8g09330.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Pp3c10_1100V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c15_12280V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Solyc02g080220.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083840.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g123630.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc05g047590.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc06g009190.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc06g051960.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e017514_P001 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Zm00001e026790_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e041757_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
CC | GO:0005618 | cell wall | IEA | Interproscan |
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0004096 | catalase activity | IEP | Neighborhood |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0004560 | alpha-L-fucosidase activity | IEP | Neighborhood |
MF | GO:0004645 | phosphorylase activity | IEP | Neighborhood |
MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Neighborhood |
MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Neighborhood |
MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Neighborhood |
MF | GO:0005231 | excitatory extracellular ligand-gated ion channel activity | IEP | Neighborhood |
MF | GO:0005234 | extracellularly glutamate-gated ion channel activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
BP | GO:0007155 | cell adhesion | IEP | Neighborhood |
MF | GO:0008066 | glutamate receptor activity | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008184 | glycogen phosphorylase activity | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
MF | GO:0015928 | fucosidase activity | IEP | Neighborhood |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0016160 | amylase activity | IEP | Neighborhood |
MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | IEP | Neighborhood |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
BP | GO:0022610 | biological adhesion | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Neighborhood |
MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
MF | GO:0022835 | transmitter-gated channel activity | IEP | Neighborhood |
MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Neighborhood |
MF | GO:0030594 | neurotransmitter receptor activity | IEP | Neighborhood |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0038023 | signaling receptor activity | IEP | Neighborhood |
CC | GO:0042597 | periplasmic space | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0047134 | protein-disulfide reductase activity | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
MF | GO:0050661 | NADP binding | IEP | Neighborhood |
MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No external refs found! |