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  5. AMTR_s00129p00102500

AMTR_s00129p00102500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00129.80

Description : 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana


Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0000139 (LandPlants) Phylogenetic Tree(s): OG_05_0000139_tree ,
OG_06_0013566 (SeedPlants) Phylogenetic Tree(s): OG_06_0013566_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00129p00102500
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267760 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AMTR_s00078p00154520 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AT1G01120 KCS1 3-ketoacyl-CoA synthase 1 0.03 Archaeplastida
AT1G04220 KCS2 3-ketoacyl-CoA synthase 2 0.03 Archaeplastida
AT2G26250 KCS10, FDH 3-ketoacyl-CoA synthase 10 0.02 Archaeplastida
AT2G46720 HIC, KCS13 3-ketoacyl-CoA synthase 13 0.04 Archaeplastida
AT4G34510 KCS17 3-ketoacyl-CoA synthase 17 0.02 Archaeplastida
AT5G04530 KCS19 3-ketoacyl-CoA synthase 19 0.02 Archaeplastida
GSVIVT01005975001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
GSVIVT01027424001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
Gb_05331 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Gb_32625 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
LOC_Os03g14170.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_10426663g0020 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_10429708g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_415118g0020 No alias 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_43136g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_45157g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_56709g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc02g063140.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Solyc02g085870.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc05g009280.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g013220.2.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Solyc06g053870.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Solyc09g083050.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Solyc11g072990.1.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e000476_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e000593_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e000868_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e001021_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e001847_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e021255_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e023474_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e033922_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e034732_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016746 transferase activity, transferring acyl groups IEA Interproscan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synth_C 65 130
IPR013601 FAE1_typ3_polyketide_synth 1 57
No external refs found!