1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00130p00028330

AMTR_s00130p00028330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.7

No description available


Gene families : OG0001717 (Archaeplastida) Phylogenetic Tree(s): OG0001717_tree ,
OG_05_0001104 (LandPlants) Phylogenetic Tree(s): OG_05_0001104_tree ,
OG_06_0000737 (SeedPlants) Phylogenetic Tree(s): OG_06_0000737_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00028330
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Gb_36829 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g13930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10134252g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_424186g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8732g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g01760.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c11_13500V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c7_17180V3.1 No alias No annotation 0.03 Archaeplastida
Solyc02g072210.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g072220.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc07g055270.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc12g010940.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037251_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0051766 inositol trisphosphate kinase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012881 DUF1685 237 280
No external refs found!