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  5. AMTR_s00132p00118400

AMTR_s00132p00118400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00132.31

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor


Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0000104 (SeedPlants) Phylogenetic Tree(s): OG_06_0000104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00132p00118400
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT3G63350 HSFA7B, AT-HSFA7B winged-helix DNA-binding transcription factor family protein 0.02 Archaeplastida
AT4G18880 HSF A4A, AT-HSFA4A heat shock transcription factor A4A 0.02 Archaeplastida
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.04 Archaeplastida
AT5G45710 HSFA4C, RHA1, AT-HSFA4C winged-helix DNA-binding transcription factor family protein 0.02 Archaeplastida
GSVIVT01020781001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.07 Archaeplastida
GSVIVT01033257001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 Archaeplastida
Gb_16343 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 Archaeplastida
LOC_Os03g12370.1 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os05g45410.1 No alias transcription factor (HSF) 0.04 Archaeplastida
LOC_Os08g36700.1 No alias transcription factor (HSF) 0.02 Archaeplastida
LOC_Os08g43334.1 No alias transcription factor (HSF) 0.02 Archaeplastida
LOC_Os09g28354.1 No alias transcription factor (HSF) 0.05 Archaeplastida
MA_10293408g0010 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 Archaeplastida
MA_110587g0010 No alias transcription factor (HSF) 0.03 Archaeplastida
MA_113508g0010 No alias transcription factor (HSF) 0.02 Archaeplastida
MA_124940g0010 No alias transcription factor (HSF) 0.03 Archaeplastida
MA_41252g0020 No alias transcription factor (HSF) 0.04 Archaeplastida
MA_43896g0010 No alias Heat stress transcription factor A-1 OS=Oryza sativa... 0.05 Archaeplastida
MA_5374g0010 No alias transcription factor (HSF) 0.06 Archaeplastida
MA_8812600g0010 No alias transcription factor (HSF) 0.02 Archaeplastida
MpVg00470.1 No alias No annotation 0.03 Archaeplastida
Pp3c1_32480V3.1 No alias heat shock factor 3 0.02 Archaeplastida
Pp3c7_4270V3.1 No alias heat shock transcription factor B4 0.04 Archaeplastida
Solyc03g006000.3.1 No alias transcription factor (HSF) 0.06 Archaeplastida
Solyc04g016000.3.1 No alias transcription factor (HSF) 0.04 Archaeplastida
Solyc04g078770.4.1 No alias transcription factor (HSF) 0.03 Archaeplastida
Solyc07g055710.3.1 No alias transcription factor (HSF) 0.03 Archaeplastida
Solyc09g009100.4.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Solyc09g059520.3.1 No alias transcription factor (HSF) 0.05 Archaeplastida
Zm00001e000467_P001 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e003755_P002 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e009944_P001 No alias transcription factor (HSF) 0.04 Archaeplastida
Zm00001e024268_P001 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e027464_P001 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e037165_P002 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e041441_P001 No alias transcription factor (HSF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003933 GTP cyclohydrolase activity IEP Neighborhood
MF GO:0003935 GTP cyclohydrolase II activity IEP Neighborhood
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019107 myristoyltransferase activity IEP Neighborhood
MF GO:0019238 cyclohydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 15 107
No external refs found!