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Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.56
Description : Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana
Gene families : OG0001445 (Archaeplastida) Phylogenetic Tree(s): OG0001445_tree ,
OG_05_0001091 (LandPlants) Phylogenetic Tree(s): OG_05_0001091_tree ,
OG_06_0001027 (SeedPlants) Phylogenetic Tree(s): OG_06_0001027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00154p00086540 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g003450 | No alias | No description available | 0.01 | Archaeplastida | |
| GSVIVT01008114001 | No alias | Zinc finger CCCH domain-containing protein 38... | 0.04 | Archaeplastida | |
| Gb_00875 | No alias | C3H zinc finger transcription factor | 0.03 | Archaeplastida | |
| Gb_19122 | No alias | C3H zinc finger transcription factor | 0.05 | Archaeplastida | |
| Gb_26302 | No alias | C3H zinc finger transcription factor | 0.04 | Archaeplastida | |
| MA_10435667g0010 | No alias | Zinc finger CCCH domain-containing protein 38... | 0.04 | Archaeplastida | |
| MA_111475g0010 | No alias | Zinc finger CCCH domain-containing protein 55 OS=Oryza... | 0.03 | Archaeplastida | |
| MA_111475g0020 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_321233g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_8408g0030 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Mp1g05400.1 | No alias | Zinc finger CCCH domain-containing protein 55 OS=Oryza... | 0.04 | Archaeplastida | |
| Pp3c4_15980V3.1 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.05 | Archaeplastida | |
| Smo439131 | No alias | No description available | 0.03 | Archaeplastida | |
| Solyc03g006350.3.1 | No alias | C3H zinc finger transcription factor | 0.03 | Archaeplastida | |
| Solyc04g064800.4.1 | No alias | C3H zinc finger transcription factor | 0.03 | Archaeplastida | |
| Solyc06g069440.3.1 | No alias | Zinc finger CCCH domain-containing protein 38... | 0.03 | Archaeplastida | |
| Zm00001e000843_P002 | No alias | Zinc finger CCCH domain-containing protein 55 OS=Oryza... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003993 | acid phosphatase activity | IEP | Neighborhood |
| MF | GO:0003995 | acyl-CoA dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0003997 | acyl-CoA oxidase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005665 | RNA polymerase II, core complex | IEP | Neighborhood |
| CC | GO:0005777 | peroxisome | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006635 | fatty acid beta-oxidation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0007154 | cell communication | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009062 | fatty acid catabolic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0016042 | lipid catabolic process | IEP | Neighborhood |
| BP | GO:0016054 | organic acid catabolic process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019395 | fatty acid oxidation | IEP | Neighborhood |
| BP | GO:0030258 | lipid modification | IEP | Neighborhood |
| CC | GO:0030880 | RNA polymerase complex | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034440 | lipid oxidation | IEP | Neighborhood |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| CC | GO:0042579 | microbody | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044242 | cellular lipid catabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044282 | small molecule catabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |