AT1G62630

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G62630
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00096910	evm_27.TU.AmTr_v1...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00062p00089750	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AMTR_s00062p00106150	evm_27.TU.AmTr_v1...	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.08	Archaeplastida
AMTR_s00062p00106420	evm_27.TU.AmTr_v1...	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00071p00163330	evm_27.TU.AmTr_v1...	Probable disease resistance protein At5g63020...	0.03	Archaeplastida
AMTR_s00099p00016470	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AT1G51480	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
GSVIVT01017136001	No alias	Probable disease resistance protein At1g61190...	0.03	Archaeplastida
GSVIVT01017149001	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.04	Archaeplastida
Gb_12858	No alias	Putative disease resistance protein At3g14460...	0.02	Archaeplastida
Gb_12859	No alias	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
Gb_18201	No alias	Probable disease resistance protein At1g61180...	0.04	Archaeplastida
Gb_37796	No alias	RNA chaperone (CSP)	0.02	Archaeplastida
LOC_Os09g14060.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10426603g0010	No alias	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
MA_359444g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_40435g0010	No alias	Probable disease resistance protein At1g61310...	0.03	Archaeplastida
MA_690530g0010	No alias	Probable disease resistance protein At5g43730...	0.04	Archaeplastida
MA_879312g0010	No alias	Putative disease resistance RPP13-like protein 3...	0.11	Archaeplastida
MA_91246g0010	No alias	Probable disease resistance protein At1g61190...	0.02	Archaeplastida
Solyc02g037540.3.1	No alias	Probable disease resistance protein At4g27220...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IDA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006066	alcohol metabolic process	IEP	Neighborhood
BP	GO:0006071	glycerol metabolic process	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016556	mRNA modification	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016841	ammonia-lyase activity	IEP	Neighborhood
BP	GO:0019400	alditol metabolic process	IEP	Neighborhood
BP	GO:0019751	polyol metabolic process	IEP	Neighborhood
BP	GO:0030002	cellular anion homeostasis	IEP	Neighborhood
BP	GO:0030320	cellular monovalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0030643	cellular phosphate ion homeostasis	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
CC	GO:0031977	thylakoid lumen	IEP	Neighborhood
CC	GO:0031978	plastid thylakoid lumen	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0043562	cellular response to nitrogen levels	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
MF	GO:0045548	phenylalanine ammonia-lyase activity	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
BP	GO:0055062	phosphate ion homeostasis	IEP	Neighborhood
BP	GO:0055081	anion homeostasis	IEP	Neighborhood
BP	GO:0055083	monovalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072501	cellular divalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072502	cellular trivalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	156	398
IPR001611	Leu-rich_rpt	557	606

External Links

No external refs found!

AT1G62630

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation