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  5. AMTR_s00159p00023000

AMTR_s00159p00023000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00159.8

Description : Polyamine metabolism.spermidine/spermine.synthesis.spermine synthase


Gene families : OG0001335 (Archaeplastida) Phylogenetic Tree(s): OG0001335_tree ,
OG_05_0001567 (LandPlants) Phylogenetic Tree(s): OG_05_0001567_tree ,
OG_06_0001721 (SeedPlants) Phylogenetic Tree(s): OG_06_0001721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00159p00023000
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00133330 evm_27.TU.AmTr_v1... Polyamine... 0.04 Archaeplastida
MA_8150579g0010 No alias spermidine synthase 0.03 Archaeplastida
Pp3c2_2980V3.1 No alias spermidine synthase 1 0.04 Archaeplastida
Solyc06g053510.3.1 No alias Putrescine N-methyltransferase 3 OS=Nicotiana tabacum... 0.02 Archaeplastida
Solyc08g014310.3.1 No alias Putrescine N-methyltransferase 2 OS=Nicotiana tabacum... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001045 Spermi_synthase 49 295
No external refs found!