1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G62975

AT1G62975


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0001232 (Archaeplastida) Phylogenetic Tree(s): OG0001232_tree ,
OG_05_0000765 (LandPlants) Phylogenetic Tree(s): OG_05_0000765_tree ,
OG_06_0000900 (SeedPlants) Phylogenetic Tree(s): OG_06_0000900_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G62975
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G12540 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.08 Archaeplastida
GSVIVT01018461001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_26737 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g01870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_14352g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_14544g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_384190g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_938775g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc02g078130.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g006910.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc03g114230.2.1 No alias Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc03g114237.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc09g074805.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e017131_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009631 cold acclimation IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009927 histidine phosphotransfer kinase activity IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0016098 monoterpenoid metabolic process IEP Neighborhood
BP GO:0016099 monoterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031537 regulation of anthocyanin metabolic process IEP Neighborhood
MF GO:0034768 (E)-beta-ocimene synthase activity IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
MF GO:0050551 myrcene synthase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Neighborhood
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080184 response to phenylpropanoid IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 74 126
No external refs found!