AT1G63000 (NRS/ER, UER1)

Aliases : NRS/ER, UER1

Description : nucleotide-rhamnose synthase/epimerase-reductase

Gene families : OG0000898 (Archaeplastida) Phylogenetic Tree(s): OG0000898_tree ,
OG_05_0005574 (LandPlants) Phylogenetic Tree(s): OG_05_0005574_tree ,
OG_06_0005340 (SeedPlants) Phylogenetic Tree(s): OG_06_0005340_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G63000
Cluster	HCCA: Cluster_230

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g083800	No alias	Trifunctional UDP-glucose...	0.02	Archaeplastida
Cre09.g387171	No alias	Carbohydrate metabolism.nucleotide sugar...	0.02	Archaeplastida
Pp3c25_5230V3.1	No alias	rhamnose biosynthesis 1	0.03	Archaeplastida
Smo439393	No alias	Carbohydrate metabolism.nucleotide sugar...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008830	dTDP-4-dehydrorhamnose 3,5-epimerase activity	IDA	Interproscan
MF	GO:0008831	dTDP-4-dehydrorhamnose reductase activity	IDA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	None	Extended
BP	GO:0009226	nucleotide-sugar biosynthetic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010253	UDP-rhamnose biosynthetic process	IDA	Interproscan
MF	GO:0010489	UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	TAS	Interproscan
MF	GO:0010490	UDP-4-keto-rhamnose-4-keto-reductase activity	TAS	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016854	racemase and epimerase activity	None	Extended
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019305	dTDP-rhamnose biosynthetic process	IDA	Interproscan
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0033478	UDP-rhamnose metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046383	dTDP-rhamnose metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004620	phospholipase activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
MF	GO:0004802	transketolase activity	IEP	Neighborhood
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Neighborhood
MF	GO:0004845	uracil phosphoribosyltransferase activity	IEP	Neighborhood
MF	GO:0004849	uridine kinase activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006006	glucose metabolic process	IEP	Neighborhood
BP	GO:0006071	glycerol metabolic process	IEP	Neighborhood
BP	GO:0006090	pyruvate metabolic process	IEP	Neighborhood
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0006096	glycolytic process	IEP	Neighborhood
BP	GO:0006099	tricarboxylic acid cycle	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Neighborhood
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0006222	UMP biosynthetic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006754	ATP biosynthetic process	IEP	Neighborhood
BP	GO:0006757	ATP generation from ADP	IEP	Neighborhood
BP	GO:0006833	water transport	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0007030	Golgi organization	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
BP	GO:0008655	pyrimidine-containing compound salvage	IEP	Neighborhood
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0009060	aerobic respiration	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009129	pyrimidine nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009130	pyrimidine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009163	nucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0009165	nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009166	nucleotide catabolic process	IEP	Neighborhood
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009173	pyrimidine ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009174	pyrimidine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009259	ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
CC	GO:0009532	plastid stroma	IEP	Neighborhood
CC	GO:0009570	chloroplast stroma	IEP	Neighborhood
BP	GO:0009749	response to glucose	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010038	response to metal ion	IEP	Neighborhood
BP	GO:0010043	response to zinc ion	IEP	Neighborhood
BP	GO:0010138	pyrimidine ribonucleotide salvage	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
BP	GO:0010498	proteasomal protein catabolic process	IEP	Neighborhood
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0010962	regulation of glucan biosynthetic process	IEP	Neighborhood
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Neighborhood
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Neighborhood
BP	GO:0017014	protein nitrosylation	IEP	Neighborhood
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	Neighborhood
BP	GO:0018198	peptidyl-cysteine modification	IEP	Neighborhood
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Neighborhood
MF	GO:0019206	nucleoside kinase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019400	alditol metabolic process	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
BP	GO:0019693	ribose phosphate metabolic process	IEP	Neighborhood
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0030163	protein catabolic process	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
BP	GO:0032262	pyrimidine nucleotide salvage	IEP	Neighborhood
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0032950	regulation of beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0032951	regulation of beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
BP	GO:0042044	fluid transport	IEP	Neighborhood
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0042866	pyruvate biosynthetic process	IEP	Neighborhood
BP	GO:0043094	cellular metabolic compound salvage	IEP	Neighborhood
BP	GO:0043097	pyrimidine nucleoside salvage	IEP	Neighborhood
BP	GO:0043173	nucleotide salvage	IEP	Neighborhood
BP	GO:0043174	nucleoside salvage	IEP	Neighborhood
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0043455	regulation of secondary metabolic process	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
BP	GO:0044206	UMP salvage	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
BP	GO:0045333	cellular respiration	IEP	Neighborhood
BP	GO:0046031	ADP metabolic process	IEP	Neighborhood
BP	GO:0046034	ATP metabolic process	IEP	Neighborhood
BP	GO:0046049	UMP metabolic process	IEP	Neighborhood
BP	GO:0046112	nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046132	pyrimidine ribonucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0046134	pyrimidine nucleoside biosynthetic process	IEP	Neighborhood
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0046686	response to cadmium ion	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:0046939	nucleotide phosphorylation	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0051259	protein complex oligomerization	IEP	Neighborhood
BP	GO:0051262	protein tetramerization	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
BP	GO:0055074	calcium ion homeostasis	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0090407	organophosphate biosynthetic process	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:1901141	regulation of lignin biosynthetic process	IEP	Neighborhood
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Neighborhood
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:2000904	regulation of starch metabolic process	IEP	Neighborhood
BP	GO:2001006	regulation of cellulose biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR029903	RmlD-like-bd	15	188

External Links

No external refs found!

AT1G63000 (NRS/ER, UER1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation