AT1G63480


Description : AT hook motif DNA-binding family protein


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0000180 (SeedPlants) Phylogenetic Tree(s): OG_06_0000180_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G63480
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00085280 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
AT4G22770 No alias AT hook motif DNA-binding family protein 0.05 Archaeplastida
GSVIVT01013426001 No alias AT-hook motif nuclear-localized protein 10... 0.06 Archaeplastida
GSVIVT01027617001 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g57820.1 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os10g42230.2 No alias AT-hook motif nuclear-localized protein 10... 0.04 Archaeplastida
Solyc08g008030.3.1 No alias AT-hook motif nuclear-localized protein 5 OS=Arabidopsis... 0.03 Archaeplastida
Solyc08g079630.3.1 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc08g080960.4.1 No alias AT-hook motif nuclear-localized protein 5 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g094710.2.1 No alias AT-hook motif nuclear-localized protein 10... 0.04 Archaeplastida
Zm00001e002444_P001 No alias AT-hook motif nuclear-localized protein 10... 0.05 Archaeplastida
Zm00001e003567_P004 No alias AT-hook motif nuclear-localized protein 10... 0.03 Archaeplastida
Zm00001e009148_P001 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e013520_P002 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e037798_P002 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
Zm00001e041401_P002 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006346 methylation-dependent chromatin silencing RCA Interproscan
BP GO:0031048 chromatin silencing by small RNA RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000578 embryonic axis specification IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0001763 morphogenesis of a branching structure IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
BP GO:0003156 regulation of animal organ formation IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009786 regulation of asymmetric cell division IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009942 longitudinal axis specification IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010148 transpiration IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
BP GO:0010223 secondary shoot formation IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010346 shoot axis formation IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0016925 protein sumoylation IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
CC GO:0030139 endocytic vesicle IEP Neighborhood
BP GO:0030155 regulation of cell adhesion IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
MF GO:0031386 protein tag IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048281 inflorescence morphogenesis IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048479 style development IEP Neighborhood
BP GO:0048480 stigma development IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048504 regulation of timing of animal organ formation IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000027 regulation of animal organ morphogenesis IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 162 275
No external refs found!