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  5. AMTR_s00216p00024260

AMTR_s00216p00024260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00216.4

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000249 (Archaeplastida) Phylogenetic Tree(s): OG0000249_tree ,
OG_05_0000734 (LandPlants) Phylogenetic Tree(s): OG_05_0000734_tree ,
OG_06_0000499 (SeedPlants) Phylogenetic Tree(s): OG_06_0000499_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00216p00024260
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00215p00017850 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G17840 ATWBC11, ABCG11,... white-brown complex homolog protein 11 0.03 Archaeplastida
AT1G51460 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
AT3G21090 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
GSVIVT01002136001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01031529001 No alias Solute transport.primary active transport.ABC... 0.06 Archaeplastida
GSVIVT01037566001 No alias ABC transporter G family member 11 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_18403 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.05 Archaeplastida
Gb_18495 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.02 Archaeplastida
Gb_34149 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os04g44610.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os09g03939.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os09g29660.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10436774g0010 No alias subfamily ABCG transporter 0.05 Archaeplastida
MA_69480g0010 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.02 Archaeplastida
MA_7934311g0010 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.02 Archaeplastida
Mp2g16700.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.04 Archaeplastida
Pp3c10_22200V3.1 No alias ABC-2 type transporter family protein 0.02 Archaeplastida
Pp3c3_33380V3.1 No alias white-brown complex homolog protein 11 0.02 Archaeplastida
Pp3c6_10410V3.1 No alias white-brown complex homolog protein 11 0.04 Archaeplastida
Pp3c9_19220V3.1 No alias white-brown complex homolog protein 11 0.02 Archaeplastida
Smo111387 No alias ABC transporter G family member 15 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo167920 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo171321 No alias Solute transport.primary active transport.ABC... 0.06 Archaeplastida
Smo234186 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
Solyc01g105387.1.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc01g105450.4.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc03g019760.4.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.05 Archaeplastida
Solyc11g009100.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc11g065350.2.1 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e012621_P002 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e027165_P003 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e033298_P002 No alias subfamily ABCG transporter 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 202 409
IPR003439 ABC_transporter-like 6 63
No external refs found!