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  5. AT1G64540

AT1G64540


Description : F-box/FBD-like domains containing protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G64540
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.09 Archaeplastida
AT1G52650 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT2G29910 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT2G29930 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT3G44080 No alias F-box family protein 0.05 Archaeplastida
AT3G44090 No alias F-box family protein 0.04 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT3G58880 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G58920 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G59190 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.08 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.05 Archaeplastida
AT3G62440 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT5G25860 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.05 Archaeplastida
AT5G38396 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G41630 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex IEP Neighborhood
MF GO:0004034 aldose 1-epimerase activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0005302 L-tyrosine transmembrane transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0015173 aromatic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 145 169
IPR001810 F-box_dom 7 41
No external refs found!