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  5. AT1G06150

AT1G06150 (EMB1444)


Aliases : EMB1444

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0001327 (Archaeplastida) Phylogenetic Tree(s): OG0001327_tree ,
OG_05_0000903 (LandPlants) Phylogenetic Tree(s): OG_05_0000903_tree ,
OG_06_0010144 (SeedPlants) Phylogenetic Tree(s): OG_06_0010144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G06150
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037572001 No alias Transcription factor LHW OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os12g06335.1 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_18030g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015411_P002 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e024625_P002 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005451 monovalent cation:proton antiporter activity IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
MF GO:0010348 lithium:proton antiporter activity IEP Neighborhood
BP GO:0010351 lithium ion transport IEP Neighborhood
BP GO:0010352 lithium ion export across the plasma membrane IEP Neighborhood
MF GO:0015081 sodium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015385 sodium:proton antiporter activity IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:0140115 export across plasma membrane IEP Neighborhood
BP GO:2001289 lipid X metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1171 1196
IPR002885 Pentatricopeptide_repeat 908 933
IPR002885 Pentatricopeptide_repeat 937 965
IPR025610 MYC/MYB_N 5 156
IPR002885 Pentatricopeptide_repeat 995 1043
IPR002885 Pentatricopeptide_repeat 1096 1143
IPR002885 Pentatricopeptide_repeat 834 880
No external refs found!