AT1G68640 (PAN)

Aliases : PAN

Description : bZIP transcription factor family protein

Gene families : OG0000414 (Archaeplastida) Phylogenetic Tree(s): OG0000414_tree ,
OG_05_0000218 (LandPlants) Phylogenetic Tree(s): OG_05_0000218_tree ,
OG_06_0041200 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G68640
Cluster	HCCA: Cluster_263

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00031p00017860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.03	Archaeplastida
GSVIVT01011929001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.05	Archaeplastida
GSVIVT01036134001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.04	Archaeplastida
LOC_Os06g15480.2	No alias	transcription factor (bZIP). transcription factor (TGA)....	0.05	Archaeplastida
Pp3c1_21760V3.1	No alias	TGACG motif-binding factor 6	0.03	Archaeplastida
Solyc05g009660.4.1	No alias	transcription factor (bZIP). transcription factor (TGA)....	0.03	Archaeplastida
Solyc12g056860.2.1	No alias	transcription factor (bZIP). transcription factor (TGA)	0.03	Archaeplastida
Zm00001e030941_P001	No alias	transcription factor (bZIP). transcription factor (TGA)	0.05	Archaeplastida
Zm00001e041747_P002	No alias	transcription factor (bZIP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IPI	Interproscan
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009410	response to xenobiotic stimulus	RCA	Interproscan
BP	GO:0009909	regulation of flower development	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030968	endoplasmic reticulum unfolded protein response	RCA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048449	floral organ formation	None	Extended
BP	GO:0048451	petal formation	RCA	Interproscan
BP	GO:0048453	sepal formation	RCA	Interproscan
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint	IEP	Neighborhood
BP	GO:0000077	DNA damage checkpoint	IEP	Neighborhood
CC	GO:0000229	cytoplasmic chromosome	IEP	Neighborhood
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	Neighborhood
BP	GO:0000725	recombinational repair	IEP	Neighborhood
CC	GO:0000790	nuclear chromatin	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003697	single-stranded DNA binding	IEP	Neighborhood
MF	GO:0003730	mRNA 3'-UTR binding	IEP	Neighborhood
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0004844	uracil DNA N-glycosylase activity	IEP	Neighborhood
CC	GO:0005663	DNA replication factor C complex	IEP	Neighborhood
CC	GO:0005697	telomerase holoenzyme complex	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006260	DNA replication	IEP	Neighborhood
BP	GO:0006261	DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:0006268	DNA unwinding involved in DNA replication	IEP	Neighborhood
BP	GO:0006270	DNA replication initiation	IEP	Neighborhood
BP	GO:0006275	regulation of DNA replication	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006302	double-strand break repair	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007000	nucleolus organization	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
MF	GO:0008327	methyl-CpG binding	IEP	Neighborhood
BP	GO:0008356	asymmetric cell division	IEP	Neighborhood
MF	GO:0008381	mechanosensitive ion channel activity	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
CC	GO:0009508	plastid chromosome	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
CC	GO:0009925	basal plasma membrane	IEP	Neighborhood
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010016	shoot system morphogenesis	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010073	meristem maintenance	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010082	regulation of root meristem growth	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
BP	GO:0010338	leaf formation	IEP	Neighborhood
BP	GO:0010358	leaf shaping	IEP	Neighborhood
CC	GO:0010369	chromocenter	IEP	Neighborhood
MF	GO:0010385	double-stranded methylated DNA binding	IEP	Neighborhood
BP	GO:0010424	DNA methylation on cytosine within a CG sequence	IEP	Neighborhood
MF	GO:0010428	methyl-CpNpG binding	IEP	Neighborhood
MF	GO:0010429	methyl-CpNpN binding	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010564	regulation of cell cycle process	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010638	positive regulation of organelle organization	IEP	Neighborhood
BP	GO:0010639	negative regulation of organelle organization	IEP	Neighborhood
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0019827	stem cell population maintenance	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
BP	GO:0031055	chromatin remodeling at centromere	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031497	chromatin assembly	IEP	Neighborhood
BP	GO:0031507	heterochromatin assembly	IEP	Neighborhood
BP	GO:0031508	pericentric heterochromatin assembly	IEP	Neighborhood
BP	GO:0031570	DNA integrity checkpoint	IEP	Neighborhood
MF	GO:0031624	ubiquitin conjugating enzyme binding	IEP	Neighborhood
BP	GO:0031935	regulation of chromatin silencing	IEP	Neighborhood
BP	GO:0031937	positive regulation of chromatin silencing	IEP	Neighborhood
BP	GO:0032205	negative regulation of telomere maintenance	IEP	Neighborhood
BP	GO:0032210	regulation of telomere maintenance via telomerase	IEP	Neighborhood
BP	GO:0032211	negative regulation of telomere maintenance via telomerase	IEP	Neighborhood
BP	GO:0032392	DNA geometric change	IEP	Neighborhood
BP	GO:0032508	DNA duplex unwinding	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0032776	DNA methylation on cytosine	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0033044	regulation of chromosome organization	IEP	Neighborhood
MF	GO:0034061	DNA polymerase activity	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0040020	regulation of meiotic nuclear division	IEP	Neighborhood
BP	GO:0040029	regulation of gene expression, epigenetic	IEP	Neighborhood
MF	GO:0042162	telomeric DNA binding	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0044390	ubiquitin-like protein conjugating enzyme binding	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood
CC	GO:0045177	apical part of cell	IEP	Neighborhood
BP	GO:0045926	negative regulation of growth	IEP	Neighborhood
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046620	regulation of organ growth	IEP	Neighborhood
BP	GO:0046621	negative regulation of organ growth	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048439	flower morphogenesis	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048598	embryonic morphogenesis	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048640	negative regulation of developmental growth	IEP	Neighborhood
BP	GO:0048826	cotyledon morphogenesis	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050982	detection of mechanical stimulus	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051129	negative regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051301	cell division	IEP	Neighborhood
BP	GO:0051445	regulation of meiotic cell cycle	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
BP	GO:0051783	regulation of nuclear division	IEP	Neighborhood
BP	GO:0051865	protein autoubiquitination	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0060968	regulation of gene silencing	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
BP	GO:0065001	specification of axis polarity	IEP	Neighborhood
BP	GO:0070828	heterochromatin organization	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:0090308	regulation of methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0090309	positive regulation of methylation-dependent chromatin silencing	IEP	Neighborhood
MF	GO:0097506	deaminated base DNA N-glycosylase activity	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood
CC	GO:0098687	chromosomal region	IEP	Neighborhood
BP	GO:0098727	maintenance of cell number	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
BP	GO:1902275	regulation of chromatin organization	IEP	Neighborhood
BP	GO:1904356	regulation of telomere maintenance via telomere lengthening	IEP	Neighborhood
BP	GO:1904357	negative regulation of telomere maintenance via telomere lengthening	IEP	Neighborhood
BP	GO:1905269	positive regulation of chromatin organization	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000278	regulation of DNA biosynthetic process	IEP	Neighborhood
BP	GO:2000279	negative regulation of DNA biosynthetic process	IEP	Neighborhood
BP	GO:2001251	negative regulation of chromosome organization	IEP	Neighborhood
BP	GO:2001252	positive regulation of chromosome organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025422	TGA_domain	251	324
IPR004827	bZIP	166	206

External Links

No external refs found!

AT1G68640 (PAN)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation