AT1G06550

Description : ATP-dependent caseinolytic (Clp) protease/crotonase family protein

Gene families : OG0000622 (Archaeplastida) Phylogenetic Tree(s): OG0000622_tree ,
OG_05_0000443 (LandPlants) Phylogenetic Tree(s): OG_05_0000443_tree ,
OG_06_0000344 (SeedPlants) Phylogenetic Tree(s): OG_06_0000344_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G06550
Cluster	HCCA: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01020843001	No alias	3-hydroxyisobutyryl-CoA hydrolase-like protein 5...	0.04	Archaeplastida
MA_105804g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_669479g0010	No alias	3-hydroxyisobutyryl-CoA hydrolase-like protein 5...	0.03	Archaeplastida
MA_9997874g0010	No alias	No annotation	0.03	Archaeplastida
Mp3g17110.1	No alias	3-hydroxyisobutyryl-CoA hydrolase-like protein 5...	0.03	Archaeplastida
Pp3c22_10130V3.1	No alias	ATP-dependent caseinolytic (Clp) protease/crotonase...	0.04	Archaeplastida
Smo413062	No alias	3-hydroxyisobutyryl-CoA hydrolase-like protein 5...	0.06	Archaeplastida
Solyc01g094090.4.1	No alias	enoyl-CoA hydratase. 3-hydroxyisobutyryl-CoA hydrolase	0.04	Archaeplastida
Solyc01g108800.4.1	No alias	enoyl-CoA hydratase. 3-hydroxyisobutyryl-CoA hydrolase	0.03	Archaeplastida
Solyc05g032680.4.1	No alias	Probable 3-hydroxyisobutyryl-CoA hydrolase 2...	0.05	Archaeplastida
Solyc05g032690.2.1	No alias	Probable 3-hydroxyisobutyryl-CoA hydrolase 3...	0.05	Archaeplastida
Solyc07g043680.3.1	No alias	3-hydroxyisobutyryl-CoA hydrolase-like protein 5...	0.03	Archaeplastida
Solyc07g043717.1.1	No alias	3-hydroxyisobutyryl-CoA hydrolase-like protein 5...	0.05	Archaeplastida
Solyc07g044710.2.1	No alias	3-hydroxyisobutyryl-CoA hydrolase-like protein 5...	0.03	Archaeplastida
Zm00001e011379_P002	No alias	enoyl-CoA hydratase. 3-hydroxyisobutyryl-CoA hydrolase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006635	fatty acid beta-oxidation	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016289	CoA hydrolase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016790	thiolester hydrolase activity	None	Extended
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030258	lipid modification	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055114	oxidation-reduction process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003840	obsolete gamma-glutamyltransferase activity	IEP	Neighborhood
MF	GO:0003878	ATP citrate synthase activity	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006084	acetyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006637	acyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
MF	GO:0008474	palmitoyl-(protein) hydrolase activity	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009259	ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
CC	GO:0009346	citrate lyase complex	IEP	Neighborhood
BP	GO:0009411	response to UV	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
CC	GO:0009705	plant-type vacuole membrane	IEP	Neighborhood
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009743	response to carbohydrate	IEP	Neighborhood
BP	GO:0009744	response to sucrose	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
BP	GO:0009812	flavonoid metabolic process	IEP	Neighborhood
BP	GO:0009813	flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0009911	positive regulation of flower development	IEP	Neighborhood
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Neighborhood
BP	GO:0010025	wax biosynthetic process	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010166	wax metabolic process	IEP	Neighborhood
BP	GO:0010224	response to UV-B	IEP	Neighborhood
BP	GO:0010231	maintenance of seed dormancy	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015925	galactosidase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	Neighborhood
MF	GO:0016872	intramolecular lyase activity	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031312	extrinsic component of organelle membrane	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034285	response to disaccharide	IEP	Neighborhood
BP	GO:0035383	thioester metabolic process	IEP	Neighborhood
BP	GO:0035384	thioester biosynthetic process	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
CC	GO:0042406	extrinsic component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
MF	GO:0045430	chalcone isomerase activity	IEP	Neighborhood
MF	GO:0045486	naringenin 3-dioxygenase activity	IEP	Neighborhood
BP	GO:0045793	positive regulation of cell size	IEP	Neighborhood
BP	GO:0045995	regulation of embryonic development	IEP	Neighborhood
BP	GO:0046148	pigment biosynthetic process	IEP	Neighborhood
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0097437	maintenance of dormancy	IEP	Neighborhood
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:2000243	positive regulation of reproductive process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032259	HIBYL-CoA-H	22	353

External Links

No external refs found!

AT1G06550

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation