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AT1G73760


Description : RING/U-box superfamily protein


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0000151 (LandPlants) Phylogenetic Tree(s): OG_05_0000151_tree ,
OG_06_0000175 (SeedPlants) Phylogenetic Tree(s): OG_06_0000175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G73760
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00058640 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 Archaeplastida
AMTR_s00069p00114060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT3G63530 BB2, BB RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os01g06590.2 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.03 Archaeplastida
Solyc03g026150.3.1 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
BP GO:0001676 long-chain fatty acid metabolic process IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005828 kinetochore microtubule IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0007052 mitotic spindle organization IEP Neighborhood
BP GO:0007163 establishment or maintenance of cell polarity IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
CC GO:0009574 preprophase band IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0015645 fatty acid ligase activity IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0030041 actin filament polymerization IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
CC GO:0031209 SCAR complex IEP Neighborhood
MF GO:0031219 levanase activity IEP Neighborhood
MF GO:0031957 very long-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0046577 long-chain-alcohol oxidase activity IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048826 cotyledon morphogenesis IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051418 microtubule nucleation by microtubule organizing center IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
CC GO:0072686 mitotic spindle IEP Neighborhood
BP GO:0080092 regulation of pollen tube growth IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000122 negative regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 318 360
No external refs found!