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Description : RING/U-box superfamily protein
Gene families : OG0008346 (Archaeplastida) Phylogenetic Tree(s): OG0008346_tree ,
OG_05_0009845 (LandPlants) Phylogenetic Tree(s): OG_05_0009845_tree ,
OG_06_0024936 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G01670 | |
| Cluster | HCCA: Cluster_147 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G01680 | ATPUB54, PUB54 | plant U-box 54 | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005673 | transcription factor TFIIE complex | IEP | Neighborhood |
| BP | GO:0006897 | endocytosis | IEP | Neighborhood |
| BP | GO:0010018 | far-red light signaling pathway | IEP | Neighborhood |
| BP | GO:0032386 | regulation of intracellular transport | IEP | Neighborhood |
| BP | GO:0032388 | positive regulation of intracellular transport | IEP | Neighborhood |
| BP | GO:0033157 | regulation of intracellular protein transport | IEP | Neighborhood |
| BP | GO:0044088 | regulation of vacuole organization | IEP | Neighborhood |
| BP | GO:0044090 | positive regulation of vacuole organization | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0051026 | chiasma assembly | IEP | Neighborhood |
| BP | GO:0051050 | positive regulation of transport | IEP | Neighborhood |
| BP | GO:0051222 | positive regulation of protein transport | IEP | Neighborhood |
| BP | GO:0051223 | regulation of protein transport | IEP | Neighborhood |
| BP | GO:0060341 | regulation of cellular localization | IEP | Neighborhood |
| BP | GO:0070201 | regulation of establishment of protein localization | IEP | Neighborhood |
| BP | GO:0070536 | protein K63-linked deubiquitination | IEP | Neighborhood |
| BP | GO:0071108 | protein K48-linked deubiquitination | IEP | Neighborhood |
| BP | GO:0071490 | cellular response to far red light | IEP | Neighborhood |
| BP | GO:0090087 | regulation of peptide transport | IEP | Neighborhood |
| BP | GO:0090316 | positive regulation of intracellular protein transport | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| BP | GO:0098657 | import into cell | IEP | Neighborhood |
| BP | GO:1903827 | regulation of cellular protein localization | IEP | Neighborhood |
| BP | GO:1903829 | positive regulation of cellular protein localization | IEP | Neighborhood |
| BP | GO:1904951 | positive regulation of establishment of protein localization | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003613 | Ubox_domain | 295 | 364 |
| No external refs found! |