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  5. AT2G02080

AT2G02080 (IDD4, AtIDD4)


Aliases : IDD4, AtIDD4

Description : indeterminate(ID)-domain 4


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G02080
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00098860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01016867001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01025658001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os01g09850.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g45054.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g13400.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os08g44050.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.03 Archaeplastida
Pp3c2_20240V3.1 No alias indeterminate(ID)-domain 2 0.03 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
Solyc07g053570.4.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e000980_P002 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e004751_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e010319_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034898_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000035 acyl binding IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004520 endodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005769 early endosome IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
BP GO:0006266 DNA ligation IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006294 nucleotide-excision repair, preincision complex assembly IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0010044 response to aluminum ion IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010213 non-photoreactive DNA repair IEP Neighborhood
BP GO:0010353 response to trehalose IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0010562 positive regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0010922 positive regulation of phosphatase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
MF GO:0016417 S-acyltransferase activity IEP Neighborhood
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017108 5'-flap endonuclease activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0035306 positive regulation of dephosphorylation IEP Neighborhood
BP GO:0035510 DNA dealkylation IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0045937 positive regulation of phosphate metabolic process IEP Neighborhood
MF GO:0048256 flap endonuclease activity IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051345 positive regulation of hydrolase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070988 demethylation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0080111 DNA demethylation IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
BP GO:1901968 regulation of polynucleotide 3'-phosphatase activity IEP Neighborhood
BP GO:1901969 positive regulation of polynucleotide 3'-phosphatase activity IEP Neighborhood
BP GO:1901971 regulation of DNA-5-methylcytosine glycosylase activity IEP Neighborhood
BP GO:1901972 positive regulation of DNA-5-methylcytosine glycosylase activity IEP Neighborhood
BP GO:1902544 regulation of DNA N-glycosylase activity IEP Neighborhood
BP GO:1902546 positive regulation of DNA N-glycosylase activity IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 83 105
No external refs found!