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  5. AT2G03780

AT2G03780


Description : Translin family protein


Gene families : OG0007458 (Archaeplastida) Phylogenetic Tree(s): OG0007458_tree ,
OG_05_0008477 (LandPlants) Phylogenetic Tree(s): OG_05_0008477_tree ,
OG_06_0008749 (SeedPlants) Phylogenetic Tree(s): OG_06_0008749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G03780
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
MA_164736g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g005310.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEP Neighborhood
BP GO:0000098 sulfur amino acid catabolic process IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007005 mitochondrion organization IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009093 cysteine catabolic process IEP Neighborhood
BP GO:0009432 SOS response IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0019448 L-cysteine catabolic process IEP Neighborhood
BP GO:0019450 L-cysteine catabolic process to pyruvate IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0022625 cytosolic large ribosomal subunit IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0046439 L-cysteine metabolic process IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0080146 L-cysteine desulfhydrase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002848 Translin_fam 67 264
No external refs found!