Gb_02223

Description : Chitinase 6 OS=Oryza sativa subsp. japonica (sp|q6k8r2|chi6_orysj : 273.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000272 (LandPlants) Phylogenetic Tree(s): OG_05_0000272_tree ,
OG_06_0000276 (SeedPlants) Phylogenetic Tree(s): OG_06_0000276_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_02223
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243570	evm_27.TU.AmTr_v1...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.03	Archaeplastida
AMTR_s00001p00243780	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.03	Archaeplastida
AMTR_s00066p00199730	evm_27.TU.AmTr_v1...	Endochitinase EP3 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT1G05850	HOT2, ELP,...	Chitinase family protein	0.02	Archaeplastida
AT2G43580	No alias	Chitinase family protein	0.03	Archaeplastida
AT3G16920	CTL2, ATCTL2	chitinase-like protein 2	0.04	Archaeplastida
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.04	Archaeplastida
AT4G01700	No alias	Chitinase family protein	0.02	Archaeplastida
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.05	Archaeplastida
GSVIVT01035029001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
GSVIVT01038111001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01038113001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
LOC_Os02g39330.1	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os03g04060.1	No alias	Chitinase 11 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os05g33130.1	No alias	Chitinase 2 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os06g51050.1	No alias	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os06g51060.1	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os10g39680.1	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os10g39700.1	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.06	Archaeplastida
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.04	Archaeplastida
MA_10425967g0010	No alias	Basic endochitinase OS=Vitis vinifera...	0.02	Archaeplastida
MA_10427514g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_10430424g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_10431378g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10431378g0020	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_18470g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.03	Archaeplastida
MA_18470g0020	No alias	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 201.0)	0.03	Archaeplastida
MA_295712g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.07	Archaeplastida
MA_381956g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_4343642g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4984466g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_5970350g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_726207g0010	No alias	Chitinase-like protein 1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_8921185g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.02	Archaeplastida
MA_9376357g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_9682123g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Mp2g24440.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.03	Archaeplastida
Mp4g20450.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 229.0)	0.04	Archaeplastida
Mp4g20470.1	No alias	Basic endochitinase B OS=Arabidopsis thaliana...	0.05	Archaeplastida
Mp5g21830.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.02	Archaeplastida
Pp3c13_4480V3.1	No alias	Chitinase family protein	0.03	Archaeplastida
Smo14768	No alias	Chitinase 2 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
Smo426710	No alias	Endochitinase A OS=Zea mays	0.03	Archaeplastida
Solyc02g082930.3.1	No alias	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.05	Archaeplastida
Solyc04g072000.4.1	No alias	Endochitinase EP3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc09g098540.3.1	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Zm00001e027534_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Neighborhood
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	153	355

External Links

No external refs found!

Gb_02223

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation