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  5. Gb_03174

Gb_03174


Description : pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03174
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00105p00078750 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.04 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.03 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.02 Archaeplastida
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
GSVIVT01012639001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Gb_05254 No alias pectin methylesterase 0.04 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.03 Archaeplastida
Gb_28162 No alias pectin methylesterase 0.04 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.07 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os03g18860.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os04g38560.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os04g54850.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os07g49100.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os08g12410.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os08g34900.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os08g34910.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os09g26360.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10332149g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10372207g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_10434786g0010 No alias No annotation 0.03 Archaeplastida
MA_10435891g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.03 Archaeplastida
MA_158002g0020 No alias pectin methylesterase 0.02 Archaeplastida
MA_177306g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_18093g0010 No alias Pectinesterase 2.1 OS=Solanum lycopersicum... 0.02 Archaeplastida
MA_2017g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_96515g0010 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.03 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Pp3c21_22110V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.02 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc01g099950.1.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc07g064170.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc09g075330.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e004056_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007917_P002 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e009863_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e025576_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e034231_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e035838_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e041006_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e041757_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 264 561
IPR006501 Pectinesterase_inhib_dom 60 206
No external refs found!