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  5. Gb_03375

Gb_03375


Description : Chitinase 10 OS=Oryza sativa subsp. japonica (sp|q5nb11|chi10_orysj : 369.0)


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03375
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.05 Archaeplastida
AMTR_s00001p00243570 evm_27.TU.AmTr_v1... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.06 Archaeplastida
AMTR_s00001p00243680 evm_27.TU.AmTr_v1... Chitinase 3 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00001p00243780 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.04 Archaeplastida
AMTR_s00066p00199730 evm_27.TU.AmTr_v1... Endochitinase EP3 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT1G02360 No alias Chitinase family protein 0.03 Archaeplastida
AT2G43570 CHI chitinase, putative 0.05 Archaeplastida
AT2G43580 No alias Chitinase family protein 0.02 Archaeplastida
AT2G43610 No alias Chitinase family protein 0.04 Archaeplastida
AT2G43620 No alias Chitinase family protein 0.04 Archaeplastida
AT3G47540 No alias Chitinase family protein 0.03 Archaeplastida
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.03 Archaeplastida
AT4G01700 No alias Chitinase family protein 0.05 Archaeplastida
GSVIVT01007190001 No alias Basic endochitinase OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01028243001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01038111001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01038120001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_14113 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 297.0) 0.04 Archaeplastida
Gb_20316 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os01g18400.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os02g39330.1 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os03g04060.1 No alias Chitinase 11 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g41680.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g33130.1 No alias Chitinase 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os06g51050.1 No alias Chitinase 3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os06g51060.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os10g39680.1 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os10g39700.1 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.04 Archaeplastida
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10430424g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_10431378g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10431378g0020 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10435326g0010 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435764g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_18470g0020 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.03 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_3814373g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_381956g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_448160g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_4984466g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_656046g0010 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8921185g0010 No alias Basic endochitinase C OS=Secale cereale... 0.04 Archaeplastida
MA_9376357g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp2g21810.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp4g01780.1 No alias Endochitinase CH5B OS=Phaseolus vulgaris... 0.04 Archaeplastida
Mp4g20440.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 235.0) 0.03 Archaeplastida
Pp3c13_18820V3.1 No alias Chitinase family protein 0.02 Archaeplastida
Pp3c16_17090V3.1 No alias homolog of carrot EP3-3 chitinase 0.02 Archaeplastida
Pp3c26_2880V3.1 No alias Chitinase family protein 0.02 Archaeplastida
Pp3c6_130V3.1 No alias basic chitinase 0.04 Archaeplastida
Smo426710 No alias Endochitinase A OS=Zea mays 0.04 Archaeplastida
Solyc02g061770.4.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g055800.2.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.07 Archaeplastida
Solyc12g098810.2.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Zm00001e002252_P001 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e015056_P001 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e027534_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e030152_P001 No alias Basic endochitinase A OS=Secale cereale... 0.06 Archaeplastida
Zm00001e041138_P001 No alias Endochitinase B (Fragment) OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 35 267
No external refs found!