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  5. AT2G18640

AT2G18640 (GGPS4)


Aliases : GGPS4

Description : geranylgeranyl pyrophosphate synthase 4


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0001040 (LandPlants) Phylogenetic Tree(s): OG_05_0001040_tree ,
OG_06_0001095 (SeedPlants) Phylogenetic Tree(s): OG_06_0001095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18640
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT3G32040 No alias Terpenoid synthases superfamily protein 0.05 Archaeplastida
MA_10429253g0010 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
MA_10429756g0010 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
MA_4877308g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
Solyc11g011240.1.1 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004311 farnesyltranstransferase activity IDA Interproscan
MF GO:0004311 farnesyltranstransferase activity IGI Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0008299 isoprenoid biosynthetic process ISS Interproscan
BP GO:0008299 isoprenoid biosynthetic process TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004340 glucokinase activity IEP Neighborhood
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0008865 fructokinase activity IEP Neighborhood
BP GO:0009225 nucleotide-sugar metabolic process IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 108 342
No external refs found!