Gb_04048

Description : BIG-type ARF-GTPase guanyl-nucleotide exchange factor

Gene families : OG0001057 (Archaeplastida) Phylogenetic Tree(s): OG0001057_tree ,
OG_05_0002382 (LandPlants) Phylogenetic Tree(s): OG_05_0002382_tree ,
OG_06_0002235 (SeedPlants) Phylogenetic Tree(s): OG_06_0002235_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_04048
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00145310	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	Archaeplastida
AMTR_s00041p00031550	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.07	Archaeplastida
AT1G01960	EDA10	SEC7-like guanine nucleotide exchange family protein	0.15	Archaeplastida
AT3G43300	ATMIN7, BEN1	HOPM interactor 7	0.12	Archaeplastida
AT3G60860	No alias	SEC7-like guanine nucleotide exchange family protein	0.1	Archaeplastida
AT4G38200	No alias	SEC7-like guanine nucleotide exchange family protein	0.09	Archaeplastida
Cpa\|evm.model.tig00000852.23	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	Archaeplastida
Cre09.g390319	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	Archaeplastida
GSVIVT01014993001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.07	Archaeplastida
GSVIVT01023854001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.09	Archaeplastida
GSVIVT01027623001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.12	Archaeplastida
LOC_Os03g14260.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.1	Archaeplastida
LOC_Os07g37750.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.08	Archaeplastida
MA_10429864g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.09	Archaeplastida
MA_20138g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.09	Archaeplastida
MA_20563g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.12	Archaeplastida
Mp7g11590.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.09	Archaeplastida
Mp8g18220.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.12	Archaeplastida
Pp3c11_12270V3.1	No alias	SEC7-like guanine nucleotide exchange family protein	0.04	Archaeplastida
Pp3c18_8290V3.1	No alias	HOPM interactor 7	0.05	Archaeplastida
Pp3c21_12020V3.1	No alias	HOPM interactor 7	0.02	Archaeplastida
Pp3c7_14180V3.1	No alias	SEC7-like guanine nucleotide exchange family protein	0.08	Archaeplastida
Pp3c8_19790V3.1	No alias	HOPM interactor 7	0.02	Archaeplastida
Smo173646	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	Archaeplastida
Smo85621	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.05	Archaeplastida
Solyc01g091460.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.08	Archaeplastida
Solyc01g112350.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.07	Archaeplastida
Solyc12g017830.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.08	Archaeplastida
Zm00001e001058_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.13	Archaeplastida
Zm00001e010568_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.08	Archaeplastida
Zm00001e035267_P004	No alias	No annotation	0.12	Archaeplastida
Zm00001e037574_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0032012	regulation of ARF protein signal transduction	IEA	Interproscan
BP	GO:0046578	regulation of Ras protein signal transduction	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051056	regulation of small GTPase mediated signal transduction	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Neighborhood
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006013	mannose metabolic process	IEP	Neighborhood
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Neighborhood
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0006354	DNA-templated transcription, elongation	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006368	transcription elongation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Neighborhood
BP	GO:0007155	cell adhesion	IEP	Neighborhood
CC	GO:0008023	transcription elongation factor complex	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
CC	GO:0016593	Cdc73/Paf1 complex	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0022406	membrane docking	IEP	Neighborhood
BP	GO:0022610	biological adhesion	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030118	clathrin coat	IEP	Neighborhood
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030125	clathrin vesicle coat	IEP	Neighborhood
CC	GO:0030126	COPI vesicle coat	IEP	Neighborhood
CC	GO:0030127	COPII vesicle coat	IEP	Neighborhood
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Neighborhood
CC	GO:0030131	clathrin adaptor complex	IEP	Neighborhood
CC	GO:0030132	clathrin coat of coated pit	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043248	proteasome assembly	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0048278	vesicle docking	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
MF	GO:0060090	molecular adaptor activity	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood
BP	GO:0140029	exocytic process	IEP	Neighborhood
BP	GO:0140056	organelle localization by membrane tethering	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000904	Sec7_dom	613	794
IPR032629	DCB_dom	17	215
IPR015403	Sec7_C	1163	1245
IPR032691	Sec7_N	340	498
IPR032817	Mon2_C	1341	1409

External Links

No external refs found!

Gb_04048

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation