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  5. Gb_04301

Gb_04301


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0012800 (SeedPlants) Phylogenetic Tree(s): OG_06_0012800_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04301
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00056p00124480 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G63840 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Archaeplastida
AT2G18670 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G34000 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Archaeplastida
AT3G19140 DNF RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.04 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00020563.21 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cpa|evm.model.tig00020934.54 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cre01.g009101 No alias No description available 0.02 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01005189001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_14788 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_33932 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g20910.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os02g35440.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g30020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os04g50100.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10428061g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_152783g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_159453g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 Archaeplastida
MA_201864g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_229590g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_308999g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8693914g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_92848g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c19_14050V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g081780.3.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g073170.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e008020_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015805_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e031439_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 83 127
No external refs found!