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  5. Gb_04489

Gb_04489


Description : BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana (sp|q9c9v6|y1790_arath : 635.0)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000564 (LandPlants) Phylogenetic Tree(s): OG_05_0000564_tree ,
OG_06_0000455 (SeedPlants) Phylogenetic Tree(s): OG_06_0000455_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04489
Cluster HCCA: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00109650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.02 Archaeplastida
AMTR_s00122p00139490 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G50280 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT3G08570 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT3G15570 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT5G48800 No alias Phototropic-responsive NPH3 family protein 0.05 Archaeplastida
GSVIVT01000146001 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035968001 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_00052 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_15614 No alias BTB/POZ domain-containing protein At1g03010... 0.04 Archaeplastida
LOC_Os03g10800.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g40100.1 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
LOC_Os12g41910.2 No alias BTB/POZ domain-containing protein At1g30440... 0.02 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10592g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
MA_9526427g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g20760.1 No alias BTB/POZ domain-containing protein At1g30440... 0.02 Archaeplastida
Mp5g03480.1 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.05 Archaeplastida
Solyc02g064720.3.1 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g044090.4.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g048000.3.1 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
Zm00001e006563_P001 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 259 543
No external refs found!