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  5. Gb_04674

Gb_04674


Description : Sar1-GTPase-regulating protein (Sec16)


Gene families : OG0000907 (Archaeplastida) Phylogenetic Tree(s): OG0000907_tree ,
OG_05_0000738 (LandPlants) Phylogenetic Tree(s): OG_05_0000738_tree ,
OG_06_0003044 (SeedPlants) Phylogenetic Tree(s): OG_06_0003044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04674
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00148170 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.11 Archaeplastida
AT5G47480 No alias RGPR-related 0.12 Archaeplastida
Cre01.g008850 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
GSVIVT01018158001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
LOC_Os02g01490.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 Archaeplastida
LOC_Os06g01650.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.02 Archaeplastida
MA_10427360g0010 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 Archaeplastida
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.08 Archaeplastida
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
Pp3c12_25260V3.1 No alias RGPR-related 0.02 Archaeplastida
Pp3c4_2860V3.1 No alias RGPR-related 0.02 Archaeplastida
Smo442780 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Smo446951 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Solyc08g007340.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 Archaeplastida
Solyc08g007360.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 Archaeplastida
Zm00001e013404_P001 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
Zm00001e025399_P002 No alias Sar1-GTPase-regulating protein (Sec16) 0.08 Archaeplastida
Zm00001e029805_P005 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR024340 Sec16_CCD 699 821
IPR024298 ACE1_Sec16_Sec31 884 1173
No external refs found!