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  5. Gb_05997

Gb_05997


Description : NOG1 LSU processome regulatory GTPase


Gene families : OG0003912 (Archaeplastida) Phylogenetic Tree(s): OG0003912_tree ,
OG_05_0003948 (LandPlants) Phylogenetic Tree(s): OG_05_0003948_tree ,
OG_06_0004055 (SeedPlants) Phylogenetic Tree(s): OG_06_0004055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05997
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.03 Archaeplastida
Pp3c20_4830V3.1 No alias Nucleolar GTP-binding protein 0.02 Archaeplastida
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR012973 NOG_C 411 464
IPR010674 NOG1_Rossman_fold_dom 235 292
No external refs found!