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  5. Gb_07677

Gb_07677


Description : no description available(sp|q8h994|crj33_cryja : 260.0)


Gene families : OG0000084 (Archaeplastida) Phylogenetic Tree(s): OG0000084_tree ,
OG_05_0000662 (LandPlants) Phylogenetic Tree(s): OG_05_0000662_tree ,
OG_06_0000354 (SeedPlants) Phylogenetic Tree(s): OG_06_0000354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07677
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252040 evm_27.TU.AmTr_v1... Thaumatin-like protein OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00041p00163280 evm_27.TU.AmTr_v1... Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G75030 ATLP-3, TLP-3 thaumatin-like protein 3 0.03 Archaeplastida
Cre02.g102300 No alias No description available 0.01 Archaeplastida
GSVIVT01009930001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01019835001 No alias Thaumatin-like protein OS=Actinidia deliciosa 0.03 Archaeplastida
Gb_25722 No alias no description available(sp|q5dwg1|crj35_cryja : 343.0) 0.03 Archaeplastida
LOC_Os03g45960.1 No alias Zeamatin OS=Zea mays (sp|p33679|zeam_maize : 280.0) 0.02 Archaeplastida
LOC_Os06g50240.1 No alias no description available(sp|q9ff29|pr5k_arath : 221.0) 0.02 Archaeplastida
LOC_Os12g43450.1 No alias Thaumatin-like protein OS=Actinidia deliciosa... 0.02 Archaeplastida
MA_10429511g0010 No alias no description available(sp|q5dwg2|crj34_cryja : 272.0) 0.03 Archaeplastida
MA_132199g0010 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_152803g0010 No alias No annotation 0.02 Archaeplastida
MA_4708809g0010 No alias no description available(sp|q5dwg2|crj34_cryja : 117.0) 0.02 Archaeplastida
MA_5112537g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5816145g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g083790.4.1 No alias no description available(sp|q9ff29|pr5k_arath : 270.0) 0.03 Archaeplastida
Solyc08g080640.2.1 No alias Protein NP24 OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc08g080650.3.1 No alias Osmotin-like protein OSML13 OS=Solanum commersonii... 0.03 Archaeplastida
Solyc12g056390.1.1 No alias Pathogenesis-related protein R major form OS=Nicotiana... 0.04 Archaeplastida
Zm00001e037227_P002 No alias no description available(sp|q9ff29|pr5k_arath : 224.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001938 Thaumatin 114 179
IPR001938 Thaumatin 24 111
No external refs found!