Gb_08947


Description : cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of nuclear pore complex


Gene families : OG0005699 (Archaeplastida) Phylogenetic Tree(s): OG0005699_tree ,
OG_05_0005057 (LandPlants) Phylogenetic Tree(s): OG_05_0005057_tree ,
OG_06_0004420 (SeedPlants) Phylogenetic Tree(s): OG_06_0004420_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08947
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025508001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
MA_31606g0010 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
MA_903935g0010 No alias Nuclear pore complex protein NUP214 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g04100.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
Solyc02g032380.3.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
Zm00001e035895_P006 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!