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  5. Gb_09959

Gb_09959


Description : Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana (sp|q9t0a0|lacs4_arath : 739.0) & Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond(50.6.2 : 375.3)


Gene families : OG0000625 (Archaeplastida) Phylogenetic Tree(s): OG0000625_tree ,
OG_05_0009047 (LandPlants) Phylogenetic Tree(s): OG_05_0009047_tree ,
OG_06_0006159 (SeedPlants) Phylogenetic Tree(s): OG_06_0006159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09959
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00117760 evm_27.TU.AmTr_v1... Enzyme classification.EC_6 ligases.EC_6.2 ligase forming... 0.02 Archaeplastida
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.06 Archaeplastida
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.05 Archaeplastida
Gb_18621 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_32132 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_32723 No alias Long chain acyl-CoA synthetase 6, peroxisomal... 0.03 Archaeplastida
LOC_Os01g48910.2 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g04170.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g35400.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10432761g0010 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.16 Archaeplastida
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Pp3c12_20700V3.1 No alias AMP-dependent synthetase and ligase family protein 0.05 Archaeplastida
Solyc01g079240.3.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc01g109180.4.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc09g075770.3.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.03 Archaeplastida
Zm00001e024608_P001 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e040332_P001 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Neighborhood
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 101 502
No external refs found!