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  5. Gb_10211

Gb_10211


Description : subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10211
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00010p00254310 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00045p00108620 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT1G27940 PGP13 P-glycoprotein 13 0.03 Archaeplastida
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.02 Archaeplastida
AT3G28345 No alias ABC transporter family protein 0.03 Archaeplastida
AT3G28360 PGP16 P-glycoprotein 16 0.02 Archaeplastida
AT3G28415 No alias ABC transporter family protein 0.03 Archaeplastida
AT3G62150 PGP21 P-glycoprotein 21 0.04 Archaeplastida
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.03 Archaeplastida
AT4G01830 PGP5 P-glycoprotein 5 0.04 Archaeplastida
AT4G25960 PGP2 P-glycoprotein 2 0.05 Archaeplastida
Cre17.g725150 No alias ABC transporter B family member 7 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01013125001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017696001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01021366001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01028256001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Gb_07563 No alias subfamily ABCB transporter 0.06 Archaeplastida
Gb_08706 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_13908 No alias ABC transporter B family member 10 OS=Arabidopsis... 0.02 Archaeplastida
Gb_32125 No alias subfamily ABCB transporter 0.05 Archaeplastida
Gb_33057 No alias subfamily ABCB transporter 0.07 Archaeplastida
Gb_33058 No alias subfamily ABCB transporter 0.07 Archaeplastida
LOC_Os01g18670.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os01g34970.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g35030.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g50080.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g50100.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g50160.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os02g09720.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
LOC_Os02g46680.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
LOC_Os04g38570.1 No alias auxin efflux transporter (ABCB19) 0.02 Archaeplastida
LOC_Os08g45030.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_10431815g0020 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
MA_10432922g0010 No alias subfamily ABCB transporter 0.05 Archaeplastida
MA_10433482g0010 No alias No annotation 0.02 Archaeplastida
MA_111099g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_560534g0010 No alias No annotation 0.02 Archaeplastida
MA_6870g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.05 Archaeplastida
MA_83806g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
Mp2g11920.1 No alias subfamily ABCB transporter 0.07 Archaeplastida
Mp3g11830.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Mp7g04390.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Pp3c17_16450V3.1 No alias ATP binding cassette subfamily B19 0.02 Archaeplastida
Pp3c1_34680V3.1 No alias P-glycoprotein 10 0.04 Archaeplastida
Smo230688 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo231714 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo408755 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
Smo410515 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo419451 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Smo74892 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo99885 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc03g005860.4.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc03g093650.3.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc03g122070.3.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Solyc06g009280.1.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc09g008240.3.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc11g067300.2.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g098840.3.1 No alias subfamily ABCB transporter 0.05 Archaeplastida
Zm00001e003866_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e019933_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e025438_P001 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e028117_P001 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e041087_P002 No alias subfamily ABCB transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1083 1230
IPR003439 ABC_transporter-like 448 596
IPR011527 ABC1_TM_dom 105 378
IPR011527 ABC1_TM_dom 748 1010
No external refs found!