AT2G25230 (MYB100, AtMYB100)

Aliases : MYB100, AtMYB100

Description : myb domain protein 100

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G25230
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AT1G43330	No alias	Homeodomain-like superfamily protein	0.04	Archaeplastida
AT2G39880	AtMYB25, MYB25	myb domain protein 25	0.04	Archaeplastida
AT3G27785	PGA37, ATMYB118, MYB118	myb domain protein 118	0.04	Archaeplastida
AT4G00540	ATMYB3R2,...	myb domain protein 3r2	0.05	Archaeplastida
AT4G26930	AtMYB97, MYB97	myb domain protein 97	0.03	Archaeplastida
AT5G23000	MYB37, RAX1, ATMYB37	myb domain protein 37	0.03	Archaeplastida
AT5G39700	MYB89, AtMYB89	myb domain protein 89	0.07	Archaeplastida
Cpa\|evm.model.tig00021038.78	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
Cre07.g345350	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
MA_121533g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_129382g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_6393g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
Pp3c26_1390V3.1	No alias	myb domain protein 55	0.02	Archaeplastida
Pp3c9_15970V3.1	No alias	myb domain protein 43	0.02	Archaeplastida
Pp3c9_15975V3.1	No alias	myb domain protein 43	0.02	Archaeplastida
Solyc01g009650.1.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc01g010910.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g052850.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc09g008250.4.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc09g011780.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	Neighborhood
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	Neighborhood
MF	GO:0051219	phosphoprotein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	26	71
IPR001005	SANT/Myb	79	121

External Links

No external refs found!

AT2G25230 (MYB100, AtMYB100)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation