Gb_12396

Description : Protein trichome birefringence OS=Arabidopsis thaliana (sp|q9fg35|tbr_arath : 517.0)

Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_12396
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00032550	evm_27.TU.AmTr_v1...	Protein trichome birefringence-like 35 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00024p00162030	No alias	Protein trichome birefringence OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os05g28630.1	No alias	xylan O-acetyltransferase (XOAT)	0.02	Archaeplastida
LOC_Os12g01380.1	No alias	xylan O-acetyltransferase (XOAT)	0.04	Archaeplastida
Mp2g21170.1	No alias	Protein trichome birefringence-like 5 OS=Arabidopsis...	0.03	Archaeplastida
Pp3c5_27320V3.1	No alias	TRICHOME BIREFRINGENCE-LIKE 11	0.02	Archaeplastida
Solyc05g005100.4.1	No alias	Protein trichome birefringence-like 2 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e031480_P001	No alias	xylan O-acetyltransferase (XOAT)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR026057	PC-Esterase	448	731
IPR025846	PMR5_N_dom	393	445

External Links

No external refs found!