Gb_13082

Description : deubiquitinase (UBP24)

Gene families : OG0005695 (Archaeplastida) Phylogenetic Tree(s): OG0005695_tree ,
OG_05_0006608 (LandPlants) Phylogenetic Tree(s): OG_05_0006608_tree ,
OG_06_0007867 (SeedPlants) Phylogenetic Tree(s): OG_06_0007867_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_13082
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e010918_P001	No alias	deubiquitinase (UBP24)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
BP	GO:0000723	telomere maintenance	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003909	DNA ligase activity	IEP	Neighborhood
MF	GO:0003910	DNA ligase (ATP) activity	IEP	Neighborhood
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Neighborhood
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	Neighborhood
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006310	DNA recombination	IEP	Neighborhood
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0008192	RNA guanylyltransferase activity	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008276	protein methyltransferase activity	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008373	sialyltransferase activity	IEP	Neighborhood
BP	GO:0009452	7-methylguanosine RNA capping	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015672	monovalent inorganic cation transport	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
BP	GO:0032200	telomere organization	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
BP	GO:0036260	RNA capping	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043631	RNA polyadenylation	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0060249	anatomical structure homeostasis	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood
MF	GO:0070568	guanylyltransferase activity	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	298	652

External Links

No external refs found!

Gb_13082

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation