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  5. Gb_13703

Gb_13703


Description : Alpha-bisabolene synthase OS=Abies grandis (sp|o81086|tpsd1_abigr : 342.0)


Gene families : OG0002410 (Archaeplastida) Phylogenetic Tree(s): OG0002410_tree ,
OG_05_0001597 (LandPlants) Phylogenetic Tree(s): OG_05_0001597_tree ,
OG_06_0000711 (SeedPlants) Phylogenetic Tree(s): OG_06_0000711_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13703
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
Gb_07328 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.06 Archaeplastida
Gb_13696 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.06 Archaeplastida
Gb_15692 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.04 Archaeplastida
Gb_17941 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.04 Archaeplastida
Gb_38471 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.04 Archaeplastida
MA_10435334g0020 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.05 Archaeplastida
MA_34273g0020 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.05 Archaeplastida
MA_7940170g0010 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 229 306
No external refs found!