AT2G28660

Description : Chloroplast-targeted copper chaperone protein

Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0000136 (LandPlants) Phylogenetic Tree(s): OG_05_0000136_tree ,
OG_06_0000808 (SeedPlants) Phylogenetic Tree(s): OG_06_0000808_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28660
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00214870	evm_27.TU.AmTr_v1...	Heavy metal-associated isoprenylated plant protein 23...	0.04	Archaeplastida
AMTR_s00018p00054220	evm_27.TU.AmTr_v1...	Heavy metal-associated isoprenylated plant protein 30...	0.04	Archaeplastida
AT1G56210	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Archaeplastida
AT1G71050	HIPP20	Heavy metal transport/detoxification superfamily protein	0.04	Archaeplastida
AT3G53530	NAKR3	Chloroplast-targeted copper chaperone protein	0.04	Archaeplastida
AT3G56240	CCH	copper chaperone	0.04	Archaeplastida
AT3G56891	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Archaeplastida
AT5G17450	HIPP21	Heavy metal transport/detoxification superfamily protein	0.03	Archaeplastida
GSVIVT01013424001	No alias	No description available	0.05	Archaeplastida
GSVIVT01028973001	No alias	Heavy metal-associated isoprenylated plant protein 31...	0.03	Archaeplastida
GSVIVT01030883001	No alias	Heavy metal-associated isoprenylated plant protein 21...	0.03	Archaeplastida
GSVIVT01032731001	No alias	No description available	0.07	Archaeplastida
Gb_00188	No alias	Heavy metal-associated isoprenylated plant protein 20...	0.04	Archaeplastida
Gb_12907	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis...	0.04	Archaeplastida
Gb_20919	No alias	Heavy metal-associated isoprenylated plant protein 23...	0.04	Archaeplastida
Gb_20921	No alias	Heavy metal-associated isoprenylated plant protein 23...	0.03	Archaeplastida
Gb_20922	No alias	Heavy metal-associated isoprenylated plant protein 23...	0.04	Archaeplastida
LOC_Os01g55320.1	No alias	Heavy metal-associated isoprenylated plant protein 28...	0.04	Archaeplastida
LOC_Os01g74490.1	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os02g32814.1	No alias	copper chaperone (CCH)	0.03	Archaeplastida
LOC_Os03g02860.1	No alias	Heavy metal-associated isoprenylated plant protein 30...	0.02	Archaeplastida
LOC_Os03g22490.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os04g17100.1	No alias	Heavy metal-associated isoprenylated plant protein 27...	0.06	Archaeplastida
LOC_Os07g47480.2	No alias	Heavy metal-associated isoprenylated plant protein 36...	0.04	Archaeplastida
LOC_Os08g40130.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_13573g0010	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis...	0.05	Archaeplastida
MA_138132g0020	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_150983g0010	No alias	Heavy metal-associated isoprenylated plant protein 26...	0.02	Archaeplastida
MA_54284g0010	No alias	Heavy metal-associated isoprenylated plant protein 23...	0.03	Archaeplastida
MA_71520g0010	No alias	Heavy metal-associated isoprenylated plant protein 28...	0.06	Archaeplastida
Mp2g10650.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c10_19240V3.1	No alias	homolog of anti-oxidant 1	0.03	Archaeplastida
Pp3c9_19280V3.1	No alias	copper chaperone	0.03	Archaeplastida
Smo29653	No alias	No description available	0.02	Archaeplastida
Smo409960	No alias	No description available	0.02	Archaeplastida
Solyc01g065690.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc01g098760.4.1	No alias	Heavy metal-associated isoprenylated plant protein 33...	0.03	Archaeplastida
Solyc02g091300.3.1	No alias	Heavy metal-associated isoprenylated plant protein 20...	0.05	Archaeplastida
Solyc04g007630.2.1	No alias	Heavy metal-associated isoprenylated plant protein 20...	0.03	Archaeplastida
Solyc04g072700.4.1	No alias	Heavy metal-associated isoprenylated plant protein 24...	0.03	Archaeplastida
Solyc05g051820.3.1	No alias	Heavy metal-associated isoprenylated plant protein 23...	0.03	Archaeplastida
Solyc06g050710.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc08g075880.4.1	No alias	Heavy metal-associated isoprenylated plant protein 30...	0.04	Archaeplastida
Solyc11g073020.3.1	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis...	0.03	Archaeplastida
Solyc12g006997.1.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e000154_P001	No alias	Heavy metal-associated isoprenylated plant protein 30...	0.05	Archaeplastida
Zm00001e003565_P001	No alias	no hits & (original description: none)	0.12	Archaeplastida
Zm00001e008507_P003	No alias	Heavy metal-associated isoprenylated plant protein 27...	0.02	Archaeplastida
Zm00001e009740_P001	No alias	Heavy metal-associated isoprenylated plant protein 23...	0.04	Archaeplastida
Zm00001e015864_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e017654_P001	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e024870_P001	No alias	Heavy metal-associated isoprenylated plant protein 32...	0.03	Archaeplastida
Zm00001e025710_P001	No alias	Heavy metal-associated isoprenylated plant protein 33...	0.03	Archaeplastida
Zm00001e027825_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e028833_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e029729_P001	No alias	Heavy metal-associated isoprenylated plant protein 36...	0.04	Archaeplastida
Zm00001e035823_P003	No alias	Heavy metal-associated isoprenylated plant protein 36...	0.02	Archaeplastida
Zm00001e038214_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e039336_P002	No alias	Heavy metal-associated isoprenylated plant protein 32...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006825	copper ion transport	ISS	Interproscan
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001678	cellular glucose homeostasis	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003756	protein disulfide isomerase activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Neighborhood
MF	GO:0005249	voltage-gated potassium channel activity	IEP	Neighborhood
MF	GO:0005267	potassium channel activity	IEP	Neighborhood
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006772	thiamine metabolic process	IEP	Neighborhood
BP	GO:0007000	nucleolus organization	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0009228	thiamine biosynthetic process	IEP	Neighborhood
BP	GO:0009410	response to xenobiotic stimulus	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009682	induced systemic resistance	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
MF	GO:0015271	outward rectifier potassium channel activity	IEP	Neighborhood
BP	GO:0015853	adenine transport	IEP	Neighborhood
BP	GO:0015854	guanine transport	IEP	Neighborhood
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Neighborhood
MF	GO:0019172	glyoxalase III activity	IEP	Neighborhood
MF	GO:0022843	voltage-gated cation channel activity	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
BP	GO:0033500	carbohydrate homeostasis	IEP	Neighborhood
BP	GO:0042593	glucose homeostasis	IEP	Neighborhood
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0071322	cellular response to carbohydrate stimulus	IEP	Neighborhood
BP	GO:0071326	cellular response to monosaccharide stimulus	IEP	Neighborhood
BP	GO:0071331	cellular response to hexose stimulus	IEP	Neighborhood
BP	GO:0071333	cellular response to glucose stimulus	IEP	Neighborhood
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0080046	quercetin 4'-O-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1900407	regulation of cellular response to oxidative stress	IEP	Neighborhood
BP	GO:1900409	positive regulation of cellular response to oxidative stress	IEP	Neighborhood
BP	GO:1902882	regulation of response to oxidative stress	IEP	Neighborhood
BP	GO:1902884	positive regulation of response to oxidative stress	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	187	240

External Links

No external refs found!

AT2G28660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation