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  5. Gb_15297

Gb_15297


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000593 (LandPlants) Phylogenetic Tree(s): OG_05_0000593_tree ,
OG_06_0049324 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15297
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT2G34000 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G11110 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.02 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT4G11360 RHA1B RING-H2 finger A1B 0.03 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.02 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G30400 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G41450 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01036593001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_00010 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_22087 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_33184 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_41385 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g08200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g46100.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g49710.1 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os07g48680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g34550.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os12g42540.1 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.1 Archaeplastida
MA_15116g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_38690g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_402876g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_754688g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c20_12240V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g008640.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.02 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g006360.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e016092_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e022175_P001 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.09 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041370_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 190 232
No external refs found!