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  5. AT2G30710

AT2G30710


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0006762 (Archaeplastida) Phylogenetic Tree(s): OG0006762_tree ,
OG_05_0008517 (LandPlants) Phylogenetic Tree(s): OG_05_0008517_tree ,
OG_06_0010006 (SeedPlants) Phylogenetic Tree(s): OG_06_0010006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G30710
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cre12.g486400 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Smo232091 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
Solyc11g005010.3.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 Archaeplastida
Zm00001e023599_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000254 C-4 methylsterol oxidase activity IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
BP GO:0000919 cell plate assembly IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005771 multivesicular body IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006882 cellular zinc ion homeostasis IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006898 receptor-mediated endocytosis IEP Neighborhood
BP GO:0006900 vesicle budding from membrane IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007041 lysosomal transport IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008333 endosome to lysosome transport IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010417 glucuronoxylan biosynthetic process IEP Neighborhood
MF GO:0010427 abscisic acid binding IEP Neighborhood
CC GO:0012505 endomembrane system IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016050 vesicle organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019840 isoprenoid binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
CC GO:0030136 clathrin-coated vesicle IEP Neighborhood
CC GO:0030139 endocytic vesicle IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030276 clathrin binding IEP Neighborhood
CC GO:0030904 retromer complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032588 trans-Golgi network membrane IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0033293 monocarboxylic acid binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043178 alcohol binding IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
CC GO:0045334 clathrin-coated endocytic vesicle IEP Neighborhood
BP GO:0046520 sphingoid biosynthetic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0055069 zinc ion homeostasis IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072583 clathrin-dependent endocytosis IEP Neighborhood
BP GO:0080065 4-alpha-methyl-delta7-sterol oxidation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 148 392
No external refs found!